Publications
Read highlighted new and noteworthy DNA barcoding research articles in the Featured Publications section or browse automatically updated publication feeds from barcoding-related journals and aggregators such as Public Library of Science (PLoS) and Molecular Ecology Resources.
Featured Publications
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The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
, 40 (21), Nov 27 2012, Nucleic Acids Research -
The Chaperonin-60 Universal Target Is a Barcode for Bacteria That Enables De Novo Assembly of Metagenomic Sequence Data
, 7(11):e49755, Nov 26 2012, PLoS One -
The Effect of Geographical Scale of Sampling on DNA Barcoding
, 2012 Oct 1;61(5):851-869, Oct 1 2012, Systematic Biology -
Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems
, 7(5): e36514, May 2 2012, PLoS ONE, Discussion -
A New Species of Soapfish (Teleostei: Serranidae: Rypticus), with Redescription of R. subbifrenatus and Comments on the Use of DNA Barcoding in Systematic Studies
, No. 1, 23-36, Apr 3 2012, Copeia -
A new feather mite species of the genus Proctophyllodes Robin, 1877 (Astigmata: Proctophyllodidae) from the Long-tailed Tit Aegithalos caudatus (Passeriformes: Aegithalidae)—morphological description with DNA barcode data
, 3253: 54–61, Apr 2 2012, Zootaxa -
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
, 109 (16), Mar 27 2012, Proceedings of the National Academy of Sciences, Discussion -
DNA barcoding of parasitic nematodes: Is it kosher?
, [Epub ahead of print], Feb 2 2012, J Parasitol -
DNA barcoding of the leaf-mining moth subgenus Ectoedemia s. str. (Lepidoptera: Nepticulidae) with COI and EF1-α: two are better than one in recognising cryptic species
, 81 (1) – 2012, Jan 24 2012, Contributions to Zoology -
New taxonomy and old collections: integratingDNA barcoding into the collection curation process
, DOI: 10.1111/j.1755-0998.2011.03105.x, Jan 4 2012, Molecular Ecology Resources -
Noninvasive molecular methods to identify live scarab larvae: an example of sympatric pest and nonpest species in New Zealand
, Published Online, Dec 22 2011, Molecular Ecology Resources -
Use of DNA barcodes to identify invasive armyworm Spodoptera species in Florida
, Vol. 11 | Article 154, Nov 10 2011, Journal of Insect Science -
Mercury Concentrations in Fish Jerky Snack Food: Marlin, Ahi, and Salmon
, 10:90, Oct 11 2011, Environmental Health -
Molecular and morphological characterisation of Pseudococcidae surveyed on crops and ornamental plants in Spain.
, FirstView Article : pp 1-8, Oct 10 2011, Bulletin of Entomological Research, Discussion -
Misidentification of OLGA-PH-J/92, believed to be the only crustacean cell line
, 47:665–674, Sep 22 2011, The Society for In Vitro Biology, Discussion -
When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? An assessment using sphingid moths
, 11:18, Aug 1 2011, BMC Ecology, Discussion -
DNA barcoding in the rust genus Chrysomyxa and its implications for the phylogeny of the genus
, [Epub ahead of print], Jun 9 2011, Mycologia, Discussion -
Nesting biology and DNA barcode analysis of Ceratina dupla and C. mikmaqi, and comparisons with C. calcarata (Hymenoptera: Apidae: Xylocopinae)
, 2011, 143:(3) 254-262, Jun 1 2011, The Canadian Entomologist, Discussion -
Choosing and Using a Plant DNA Barcode
, 6(5), May 26 2011, PLoS ONE, Discussion -
DNA barcoding resolves species complexes in Stigmella salicis and S. aurella species groups and shows additional cryptic speciation in S. salicis (Lepidoptera: Nepticulidae)
, 132 (4): 235-255, May 14 2011, Entomologisk Tidskrift -
Molecular detection of trophic links in a complex insect host–parasitoid food web
, Apr 29 2011, Molecular Ecology Resources, Discussion -
Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos
, 6(4): e17497. doi:10.1371/journal.pone.0017497, Apr 13 2011, PLoS ONE, Discussion -
Current progress in DNA barcoding and future implications for entomology
, Volume 14, Issue 2, p 107–124,, Mar 24 2011, Entomological Science, Discussion -
DNA Barcodes of Japanese Leafhoppers
, (50): 81-88, Feb 28 2011, ESAKIA, Discussion -
Exploring unknown life stages of Arctic Tanytarsini (Diptera: Chironomidae) with DNA barcoding
, 2743: 27–39, Jan 18 2011, Zootaxa, Discussion -
Accelerated construction of a regional DNA-barcode reference library: caddisflies (Trichoptera) in the Great Smoky Mountains National Park
, 30(1):131–162, Jan 11 2011, J. N. Am. Benthol. Soc, Discussion -
Applying DNA barcoding in benthology: the state of the science
, 30(1):122–124, Jan 11 2011, J. N. Am. Benthol. Soc., Discussion -
Insect conservation: A handbook of approaches and methods.
, Dec 14 2010, Oxford University Press, Oxford -
Towards a global barcode library for Lymantria (Lepidoptera: Lymantriinae) tussock moths of biosecurity concern.
, 5(12): e14280. doi:10.1371/journal.pone.0014280, Dec 10 2010, PLoS ONE -
DNA barcoding-based species delimitation increases species count of Eois (Geometridae) moths in a well-studied tropical mountain forest by up to 50%
, 00, 1-14, Nov 21 2010, Insect Science, Discussion -
Universal Plant DNA Barcode Loci May Not Work in Complex Groups: A Case Study with Indian Berberis Species
, 5 (10): e13674. doi:10.1371/journal.pone.0013674, Oct 27 2010, PLoS ONE, Discussion -
Biology without borders
, 467 , 779–781 (14 October 2010) doi:10.1038/467779a, Oct 14 2010, Nature, Discussion -
Molecular analysis of parasitoid linkages (MAPL): gut contents of adult parasitoid wasps reveal larval host
, doi: 10.1111/j.1365-294X.2010.04918.x, Oct 6 2010, Molecular Ecology, Discussion -
Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes
, 7:26, Sep 13 2010, Frontiers in Zoology, Discussion -
The Role of DNA Barcodes in Understanding and Conservation of Mammal Diversity in Southeast Asia
, (Online), Sep 3 2010, PLoS One, Discussion -
Complete DNA barcode reference library for a country’s butterfly fauna reveals high performance for temperate Europe
, Published Online, Aug 11 2010, Proc. R. Soc. B, Discussion -
Applying DNA barcoding to Korean Gracilariaceae (Rhodophyta)
, 31 (4): 387-401, Aug 3 2010, Cryptogamie, Algologie, Discussion -
Establishment of a DNA-barcode library for the Nemaliales (Rhodophyta) from Canada and France uncovers overlooked diversity in the species Nemalion helminthoides (Velley) Batters
, 31 (4): 403-421, Aug 3 2010, Cryptogamie, Algologie, Discussion -
Is routine DNA barcoding an efficient tool to reveal introductions of alien macroalgae? A case study of Agardhiella subulata (Solieriaceae, Rhodophyta) in Cape Peloro lagoon (Sicily, Italy)
, 31 (4): 423-433, Aug 3 2010, Cryptogamie, Algologie, Discussion -
DNA barcoding in the red algal order Gelidiales: comparison of COI with rbcL and verification of the “barcoding gap”
, 31 (4): 435-449, Aug 3 2010, Cryptogamie, Algologie, Discussion -
A comparative analysis of COI, LSU and UPA marker data for the Hawaiian florideophyte Rhodophyta: implications for DNA barcoding of red algae
, 31 (4): 451-465, Aug 3 2010, Cryptogamie, Algologie, Discussion -
Assessment of five markers as potential barcodes for identifying Sargassum subgenus Sargassum species (Phaeophyceae, Fucales)
, 31 (4): 467-485, Aug 3 2010, Cryptogamie, Algologie, Discussion -
An evaluation of rbcL, tufA, UPA, LSU and ITS as DNA barcode markers for the marine green macroalgae
, 31 (4): 487-528, Aug 3 2010, Cryptogamie, Algologie, Discussion -
An assessment of proposed DNA barcodes in freshwater green algae
, 31 (4): 529-555, Aug 3 2010, Cryptogamie, Algologie, Discussion -
DNA barcoding for species identification and discovery in diatoms
, 31 (4): 557-577, Aug 3 2010, Cryptogamie, Algologie, Discussion -
Editorial by Gary Saunders and Line Le Gall
, 31 (4): 373-375, Aug 3 2010, Cryptogamie, Algologie, Discussion -
DNA barcoding of select freshwater and marine red algae (Rhodophyta)
, 31 (4): 377-386, Aug 3 2010, Cryptogamie, Algologie, Discussion -
Coupling non-destructive DNA extraction and voucher retrieval for small soft-bodied Arthropods in a high-throughput context: the example of Collembola
, Online/ Advance of Print, Jul 9 2010, Molecular Ecology Resources, Discussion -
DNA-barcoding clarifies species definitions of Finnish Apatania (Trichoptera: Apataniidae)
, 21:1-11, May 27 2010, Entomologica Fennica, Discussion -
Barcoding aphids (Hemiptera: Aphididae) of the Korean Peninsula: updating the global data set
, May 24 2010, Molecular Ecology Resources, Discussion -
Comparative performances of DNA barcoding across insect orders
, 11(206) 4567-4573, Apr 27 2010, BMC Bioinformatics, Discussion -
Fossil avian eggshell preserves ancient DNA
, doi: 10.1098/rspb.2009.2019, Mar 10 2010, Proceedings of the Royal Society B., Discussion -
Lutzomyia Sand Fly Diversity and Rates of Infection by Wolbachia and an Exotic Leishmania Species on Barro Colorado Island, Panama
, 4(3):e627, Mar 9 2010, PLoS Neglected Tropical Diseases, Discussion -
DNA Barcoding and the International Barcode of Life Project in China
Vol 24 (4), Feb 18 2010, Bulletin of the Chinese Academy of Sciences -
Multiplex PCR and RFLP approaches for identification of rabbitfish (Siganus) species using mitochondrial gene regions
, 10(4) 741-743, Jan 22 2010, Molecular Ecology Resources, Discussion -
Assessing the effects of primer specificity on eliminating numt coamplification in DNA barcoding: a case study from Orthoptera (Arthropoda: Insecta)
, 10(4) 615-627, Jan 3 2010, Molecular Ecology Resources, Discussion -
Genetic barcoding of commercial Bêche-de-mer species (Echinodermata: Holothuroidea)
, 10(4) 634-646, Dec 29 2009, Molecular Ecology Resources, Discussion -
Rapid and reliable high-throughput methods of DNA extraction for use in barcoding and molecular systematics of mushrooms
, 10(4) 628-633, Dec 29 2009, Molecular Ecology Resources, Discussion -
Re-integrating earthworm juveniles into soil biodiversity studies: species identification through DNA barcoding
, 10(4) 606-614, Dec 21 2009, Molecular Ecology Resources, Discussion -
Species identification of Alnus (Betulaceae) using nrDNA and cpDNA genetic markers
, 10(4) 594-605, Dec 21 2009, Molecular Ecology Resources, Discussion -
Prospects for using DNA barcoding to identify spiders in species-rich genera
, 27-46, Jul 29 2009, ZooKeys, Discussion -
Glomus intraradices DAOM197198', a model fungus in arbuscular mycorrhiza research, is not Glomus intraradices
, 183: 1176-1187, Jun 3 2009, New Phytologist, Discussion -
High-level genetic diversity but no population structure inferred from nuclear and mitochondrial markers of the peritrichous ciliate Carchesium polypinum in the Grand River basin (North America)
, 75(10) 3187-3195, May 1 2009, Applied Environmental Microbiology, Discussion -
Ethnobotany genomics – use of DNA barcoding to explore cryptic diversity in economically important plants
, 2(5) 2-8, May 1 2009, Indian Journal of Science and Technology, Discussion -
Identification of Nearctic black flies using DNA barcodes (Diptera: Simuliidae)
, 9(s1) 224-236, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcodes to identify species and explore diversity in the Adelgidae (Insecta: Hemiptera: Aphidoidea)
, 9(s1) 188-195, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcoding a regional bee (Hymenoptera: Apoidea) fauna and its potential for ecological studies
, 9(s1) 196-207, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcode accumulation curves for understudied taxa and areas
, 9(s1) 208-216, May 1 2009, Molecular Ecology Resources, Discussion -
A new cleptoparasitic Lasioglossum (Hymenoptera, Halictidae) from Africa
, 18 74-79, May 1 2009, Journal of Hymenoptera Research, Discussion -
Combining DNA barcoding and morphological analysis to identify specialist floral parasites (Lepidoptera: Coleophoridae: Momphinae: Mompha)
, 9(s1) 217-223, May 1 2009, Molecular Ecology Resources, Discussion -
Express barcodes: racing from specimen to identification
, 9(s1) 35-41, May 1 2009, Molecular Ecology Resources, Discussion -
The front-end logistics of DNA barcoding: challenges and prospects
, 9(s1) 27-34, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcoding and the mediocrity of morphology
, 9(s1) 42-50, May 1 2009, Molecular Ecology Resources, Discussion -
Efficient algorithms for the discovery of DNA oligonucleotide barcodes from sequence databases
, 9(s1) 58-64, May 1 2009, Molecular Ecology Resources, Discussion -
Biological agent detection technologies
, 9(s1) 51-57, May 1 2009, Molecular Ecology Resources, Discussion -
Development of primers for the mitochondrial cytochrome c oxidase I gene in digenetic trematodes (Platyhelminthes) illustrates the challenge of barcoding parasitic helminths
, 9(s1) 75-82, May 1 2009, Molecular Ecology Resources, Discussion -
Countering criticisms of single mitochondrial DNA gene barcoding in birds
, 9(s1) 257-268, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcoding reveals overlooked marine fishes
, 9(s1) 237-242, May 1 2009, Molecular Ecology Resources, Discussion -
Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach
, 9(s1) 243-256, May 1 2009, Molecular Ecology Resources, Discussion -
DNA barcoding of marine crustaceans from the Estuary and Gulf of St Lawrence: a regional-scale approach
, 9(s1) 181-187, May 1 2009, Molecular Ecology Resources, Discussion -
Molecular Ecology Resources: Special Issue on Barcoding Life
Volume 9 Issue S1 1-268, Apr 23 2009, Molecular Ecology Resources, Discussion -
DNA-based species-level detection of arbuscular mycorrhizal fungi: one PCR primer set for all AMF
, 183 (1): 212-223, Apr 8 2009, New Phytologist, Discussion -
Public Health Response to Puffer Fish (Tetrodotoxin) Poisoning from Mislabeled Product
, 72(4) 810-817, Apr 1 2009, Journal of Food Protection, Discussion -
A botanical renaissance: state-of-the-art DNA bar coding facilitates an Automated Identification Technology system for plants
, 35(1) 50-60, Apr 1 2009, International Journal of Computer Applications in Technology, Discussion -
Population genetic structure of the salmon louse, Lepeophtheirus salmonis (Krøyer) on wild and farmed salmonids around the Pacific coast of Canada
, 40(8) 973-979, Mar 9 2009, Aquaculture Research, Discussion -
DNA Barcodes and Insect Biodiversity
, Oxford, UK: Blackwell Publishing. 264-273, Mar 1 2009, Insect Biodiversity: Science and Society, Discussion -
Letters to the Editor
, 100(1) 117, Mar 1 2009, Isis, Discussion -
Integrative taxonomy identifies new (and old) species in the Lasioglossum (Dialictus) tegulare (Robertson) species group (Hymenoptera, Halictidae)
, 2032 1-38, Mar 1 2009, Zootaxa, Discussion -
Fungal pathogen (mis-) identifications: A case study with DNA barcodes on Melampsora rusts of aspen and white poplar
, 113(6-7) 713-724, Feb 26 2009, Mycological Research, Discussion -
How Many Loci Does it Take to DNA Barcode a Crocus?
, 4(2) e4598, Feb 25 2009, PLoS ONE, Discussion -
Probing Evolutionary Patterns in Neotropical Birds through DNA Barcodes
, 4(2) e4379, Feb 5 2009, PLoS ONE, Discussion -
DNA barcoding for ecologists
, 24(2) 110-117, Feb 1 2009, Trends in Ecology and Evolution, Discussion -
The campaign to DNA barcode all fishes, FISH-BOL
, 74(2) 329-356., Jan 29 2009, Journal of Fish Biology, Discussion -
Species identification of North American guinea worms (Nematoda: Dracunculus) with DNA barcoding
, 9 707-712., Jan 28 2009, Molecular Ecology Resources, Discussion -
Identification of shark and ray fins using DNA barcoding
, 95(2-3) 280-288, Jan 14 2009, Fisheries Research, Discussion -
Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda)
, 6(1) 1, Jan 7 2009, Frontiers in Zoology, Discussion -
The Use of Mean Instead of Smallest Interspecific Distances Exaggerates the Size of the "Barcoding Gap" and Leads to Misidentification
, 57(5) 809-813, Jan 1 2009, Systematic Biology, Discussion -
Probing diversity in freshwater fishes from Mexico and Guatemala with DNA barcodes
, 74(2) 377-402, Jan 1 2009, Journal of Fish Biology, Discussion -
DNA Barcoding of Lepetodrilus Limpets Reveals Cryptic Species
, 27(1) 43-51, Dec 1 2008, Journal of Shellfish Research, Discussion -
Uncorrected nucleotide bias in mtDNA can mimic the effects of positive Darwinian selection
, 25(12) 2521-2524, Dec 1 2008, Molecular Ecology Resources, Discussion -
Phylogenetic relationships within the genus Tetrahymena inferred from the cytochrome c oxidase subunit 1 and the small subunit ribosomal RNA genes
, 49(3) 979-987, Dec 1 2008, Molecular Phylogenetics and Evoution, Discussion -
Integrating DNA barcoding into the mycological sciences
, 21 162-166, Dec 1 2008, Persoonia, Discussion -
Rapid Range Expansion of the Wool-Carder Bee, Anthidium manicatum (Linnaeus) (Hymenoptera: Megachilidae), in North America
, 82(1) 21-29, Jan 1 2008, Journal of the Kansas Entomological Society, Discussion -
The MexBOL Initiative
, Vol. 21 No. S1: 1-2, Mitochondrial DNA, Discussion -
Character-based, population-level DNA barcoding in Mexican species of Zamia L. (Zamiaceae: Cycadales)
, Vol. 21 No. S1: 51-59, Mitochondrial DNA, Discussion -
DNA barcodes effectively identify the morphologically similar Common Opossum (Didelphis marsupialis) and Virginia Opossum (Didelphis virginiana) from areas of sympatry in Mexico
, Vol. 21 No. S1: 44-50, Mitochondrial DNA, Discussion -
Genetic variation in avocado stem weevils Copturus aguacatae (Coleoptera: Curculionidae) in Mexico
, Vol. 21 No. S1: 38-43, Mitochondrial DNA, Discussion -
Tropical montane nymphalids in Mexico: DNA barcodes reveal greater diversity
, Vol. 21 No. S1: 30-37, Mitochondrial DNA, Discussion -
DNA barcoding reveals Mexican diversity within the freshwater leech genus Helobdella (Annelida: Glossiphoniidae)
, Vol. 21 No. S1: 24-29, Mitochondrial DNA, Discussion -
DNA barcoding a highly diverse group of parasitoid wasps (Braconidae: Doryctinae) from a Mexican nature reserve
, Vol. 21 No. S1: 18-23, Mitochondrial DNA, Discussion -
Molecular evidence that Langeronia macrocirra and Langeronia cf. parva (Trematoda: Pleurogenidae) parasites of anurans from Mexico are conspecific
, Vol. 21 No. S1: 3-11, Mitochondrial DNA, Discussion -
DNA barcodes effectively identify the morphologically similar Common Opossum (Didelphis marsupialis) and Virginia Opossum (Didelphis virginiana) from areas of sympatry in Mexico
, 21(S1): 44–50, Mitochondrial DNA, Discussion -
Joining Inventory by Parataxonomists with DNA Barcoding of a Large Complex Tropical Conserved Wildland in Northwestern Costa Rica
, 6(8), PLoS ONE, Discussion -
Protein–protein interactions of the cytochrome c oxidase DNA barcoding region
, 37, 229–236, Systematic Entomology -
Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems
, 7 (5), PLoS ONE -
Molecular Phylogeny of Indonesian Armyworm Mythimna Guenée (Lepidoptera: Noctuidae: Hadeninae) Based on CO I Gene Sequences
, Vol. 19 No 2, p 65-72, HAYATI Journal of Biosciences
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Other Resources
For more publications and materials on DNA barcoding we recommend the following resources:
PubMed
Molecular Ecology Resources
- Wing geometric morphometrics and molecular assessment of members in the Albitarsis Complex from Colombia
24 May 2013, - Genomic Resources Notes accepted 1 February 2013–31 March 2013
23 May 2013, - Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small‐scale reproducibility
20 May 2013,
PLoS
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